Population class - inherits a vector of Deme objects. More...

#include <Population.h>

Public Member Functions
bool	initialize (StateP state)
	Initialize population (serial ECF).
void	registerParameters (StateP state)
	register population specific parameters
void	write (XMLNode &)
	Write population to XMLNode (serial ECF).
void	read (XMLNode &)
	Read population from XMLNode (serial ECF). Population must be initialize()-d beforehand!
void	updateDemeStats ()
	Update, gather and write statistics of all demes; update and gather HallOfFame of all demes.
uint	getNoDemes ()
	return total number of demes
uint	getLocalDemeId ()
	return local deme index (local process in parallel ECF)
DemeP	getLocalDeme ()
	get first deme (local deme in parallel ECF)
HallOfFameP	getHof ()
	get population HallofFame
StatCalcP	getStats ()
	get population stats
Protected Attributes
uint	nDemes_
	total number of demes in the population
uint	myDemeIndex_
	global index of local deme (at local process) - PECF only
uint	nIndividuals_
	number of individuals (in each deme!)
StateP	state_
HallOfFameP	hof_
	population HallOfFame
StatCalcP	stats_
	population statistics

Detailed Description

Population class - inherits a vector of Deme objects.

Population may consist of one or more demes. The demes evolve independently of each other.

Parallel ECF: Population object of each process contains only one Deme (called the local Deme)!

Definition at line 14 of file Population.h.

Member Function Documentation

bool Population::initialize ( StateP state )

Initialize population (serial ECF).

Initialize population (parallel ECF).

Definition at line 35 of file Population.cpp.

void Population::read ( XMLNode & xPopulation )

Read population from XMLNode (serial ECF). Population must be initialize()-d beforehand!

Read population from XMLNode (parallel ECF). Population must be initialize()-d beforehand!

Definition at line 65 of file Population.cpp.

void Population::updateDemeStats ( )

Update, gather and write statistics of all demes; update and gather HallOfFame of all demes.

Update, gather and write statistics of all demes; update and gather HallOfFame of all demes. (parallel ECF)

Definition at line 100 of file Population.cpp.

void Population::write ( XMLNode & xPopulation )

Write population to XMLNode (serial ECF).

Write population to XMLNode (parallel ECF).

Definition at line 80 of file Population.cpp.

The documentation for this class was generated from the following files: