Mutation Class Reference [Evolutionary Framework, Evolutionary Operators]

Mutation class - handles mutation of _individuals_ (as opposed to MutationOp class that mutates genotypes). More...

#include <Mutation.h>

List of all members.

Public Member Functions
bool	mutate (IndividualP ind)
	Mutate an individual.
uint	mutation (const std::vector< IndividualP > &)
	Perform mutation on a pool of individuals.
void	registerParameters (StateP)
	Register mutation related but Genotype unrelated parameters.
bool	initialize (StateP)
	Initialize all mutation operators of all active genotypes.
Public Attributes
std::vector< std::vector < MutationOpP > >	operators
	vectors of mutation operators for each genotype
std::vector< std::vector < double > >	opProb
	usage probabilities for each MutationOp operator
IndividualP	currentInd
Protected Attributes
StateP	state_
double	indMutProb_
	mutation probability of an individual
uint	mutateGenotypes_
	what genotypes (if more than one) to mutate (random, all)
std::vector< bool >	protectedGenotypes_
	protected (non-mutatable) genotypes flags

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Detailed Description

Mutation class - handles mutation of _individuals_ (as opposed to MutationOp class that mutates genotypes).

Mutation class is in fact a repository of every mutation operator (MutationOp) for every active Genotype (the genotypes used in individuals). Determines which MutationOp will be used for each genotype. (every operator for every genotype has a usage probability)

Definition at line 54 of file Mutation.h.

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Member Function Documentation

bool Mutation::mutate

(

IndividualP

ind

)

Mutate an individual.

May mutate one or more genotypes in given individual. Determines which MutationOp to use on each genotype.

Definition at line 130 of file Mutation.cpp.

uint Mutation::mutation

(

const std::vector< IndividualP > &

pool

)

Perform mutation on a pool of individuals.

Mutation probability may be defined with 2 parameters:

• (not implemented!) if geneMutProb_ is defined in config, use that parameter with genotype's genome size
• otherwise use indMutProb_

Called by: Algorithm::advanceGeneration

Returns:

number of mutated individuals

Definition at line 110 of file Mutation.cpp.

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The documentation for this class was generated from the following files:

• D:/Projekt/ECF_trunk/ECF/Mutation.h
• D:/Projekt/ECF_trunk/ECF/Mutation.cpp